Pseudomonas syringae pv. cilantro strain 0788_9

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. cilantro strain 0788_9 is a Gram-negative, rod-shaped bacterium that typically arranges itself in singles. This strain is classified as a heterotroph, indicating its reliance on organic compounds for energy. It is an aerobic organism, requiring oxygen for its metabolic processes. The habitat of Pseudomonas syringae pv. cilantro strain 0788_9 is described as multiple, suggesting that it can inhabit various environments, potentially including soil and plant surfaces, which are common ecological niches for members of the Pseudomonas genus. The ability of this strain to thrive in diverse habitats may be linked to its metabolic versatility as a heterotroph, allowing it to utilize a wide range of organic substrates for growth. In summary, the combination of its Gram-negative cell wall structure, rod shape, and aerobic metabolism indicates that Pseudomonas syringae pv. cilantro strain 0788_9 is well-adapted to its ecological roles in environments where oxygen and organic matter are available. This adaptability could play a significant role in its interactions within microbial communities, particularly in agricultural settings where it may coexist with a variety of other microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. cilantro strain 0788_9

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. cilantro strain 0788_9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityPlant

Genome Summary

Pseudomonas syringae pv. cilantro strain 0788_9


Gene Summary

Adenine Count

1194266 bp

Thymine Count

1200548 bp

Guanine Count

1691002 bp

Cytosine Count

1685739 bp

Genome Length

5923202 bp

Protein-coding Genes

5201 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Repressor proteinABJ99_0471P69202-267278 - 26792523978.0
uncharacterized proteinABJ99_0472Not Available+268079 - 26851615894.3
unknown protein sequenceABJ99_0473Not Available-268986 - 26997837577.1
Chemotaxis proteinABJ99_0474Not Available+270479 - 27086814155.8
LipoproteinABJ99_0475Not Available+270909 - 2711879677.38
Hypothetical proteinABJ99_0476Not Available+271233 - 27182321096.7
uncharacterized proteinABJ99_0477Not Available+271820 - 2720086953.06
Tail sheath proteinABJ99_0478P44233+272027 - 27352353185.1
Tail tube proteinABJ99_0479Not Available+273585 - 27393212395.8
Putative bacteriophage proteinABJ99_0480Not Available+273929 - 27422510542.6

Displaying genes 1 – 10 of 5289 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

319 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 319 metabolites