Helicobacter pylori strain UM139

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain UM139 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and solitary cell arrangement. This strain thrives optimally at a temperature of 37.0°C, a condition that aligns with its habitat as a host-associated organism, typically found in the gastric environment of humans and other mammals. The microaerophilic nature of H. pylori strain UM139 suggests that it requires reduced levels of oxygen for growth, which is consistent with its adaptation to the acidic and low-oxygen conditions of the stomach lining. This unique adaptation may play a critical role in its survival and persistence within the gastric mucus layer, where it can evade the host’s immune response. Understanding the physiological traits of H. pylori strain UM139 not only contributes to the broader knowledge of gastric microbiota but also highlights the evolutionary strategies that allow this organism to inhabit a specialized ecological niche. The strain’s ability to maintain its structural integrity and metabolic function in a microaerophilic environment illustrates the complex interactions between host and microbe, emphasizing the importance of environmental factors in shaping microbial lifestyles.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain UM139

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain UM139
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain UM139


Gene Summary

Adenine Count

494285 bp

Thymine Count

494647 bp

Guanine Count

314626 bp

Cytosine Count

313906 bp

Genome Length

1617542 bp

Protein-coding Genes

1483 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
virb3 type iv secretion proteinAC785_00060Not AvailableNegative10034 - 1030010145.5
virb2 type iv secretion proteinAC785_00065Not AvailableNegative10301 - 1057610410.1
hypothetical proteinAC785_00070Not AvailableNegative10600 - 1212358650.8
hypothetical proteinAC785_00075Not AvailableNegative12130 - 1242311457.3
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive13157 - 13472Not Available
hypothetical proteinAC785_00080Not AvailableNegative12443 - 1322230458.5
5s ribosomal rnaNot AvailableNot AvailablePositive13586 - 13703Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive13935 - 16822Not Available
membrane proteinAC785_00095Not AvailableNegative17365 - 174845239.83
hypothetical proteinAC785_00105Not AvailablePositive18426 - 2025571510.3

Displaying genes 11 – 20 of 1524 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 66 in total