Stenotrophomonas daejeonensis strain JCM 16244

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas daejeonensis strain JCM 16244 is a Gram-negative, non-spore-forming bacterium that thrives in aerobic environments, with an optimal growth temperature of 29.0°C. This strain is part of the Stenotrophomonas genus, which is known for its metabolic versatility and ability to inhabit diverse ecological niches. The Gram-negative nature of S. daejeonensis indicates a complex cell wall structure, characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may contribute to its resilience in various environmental conditions. The preference for aerobic conditions suggests that S. daejeonensis relies on oxygen for its metabolic processes, which may allow it to exploit a range of organic compounds in its habitat. Its optimal growth temperature of 29.0°C implies that this strain may be well-suited for environments that are moderately warm, such as soil or water ecosystems in temperate regions. Given the traits of Stenotrophomonas daejeonensis strain JCM 16244, it may play a significant role in biogeochemical cycles, particularly in the degradation of organic materials and nutrient cycling. Its metabolic capabilities and adaptability position it as a potential contributor to microbial diversity and ecological balance in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas daejeonensis
Strainstrain JCM 16244

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas daejeonensis strain JCM 16244


Gene Summary

Adenine Count

517713 bp

Thymine Count

514884 bp

Guanine Count

1126231 bp

Cytosine Count

1126031 bp

Genome Length

3284859 bp

Protein-coding Genes

2806 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+2 - 1548Not Available
glutamyl-trna amidotransferaseABB34_00010Not Available-1181 - 162715930.5
30s ribosomal protein s21ABB34_00015Not Available-1764 - 19798614.48
23s ribosomal rnaNot AvailableNot Available+2029 - 4920Not Available
ugmp family proteinABB34_00020Not Available+2101 - 316236711.1
dihydroneopterin aldolaseABB34_00025Not Available+3313 - 367513630.5
mechanosensitive ion channel protein mscsABB34_00030Not Available+3692 - 495446454.2
beta-glucosidaseABB34_00035Not Available+5033 - 721677546.3
5s ribosomal rnaNot AvailableNot Available+5048 - 5146Not Available
hypothetical proteinABB34_00040Not Available+7479 - 798518114.5

Displaying genes 1 – 10 of 2867 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites