Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ABB29_00005 | Not Available | + | 1 - 185 | 6969.6 |
| tyrosine--trna ligase | ABB29_00010 | Q8PFT1 | - | 286 - 1494 | 44070.5 |
| membrane protein | ABB29_00015 | Not Available | + | 1680 - 3131 | 52970.3 |
| anhydro-n-acetylmuramic acid kinase | ABB29_00020 | Q4UPQ7 | + | 3231 - 4364 | 39551.0 |
| hypothetical protein | ABB29_00025 | Not Available | - | 4410 - 4640 | 8549.33 |
| mfs transporter | ABB29_00030 | P0AE17 | + | 4733 - 6055 | 47121.2 |
| dna-(apurinic or apyrimidinic site) lyase | ABB29_00035 | O26314 | - | 6080 - 6868 | 30061.9 |
| orotate phosphoribosyltransferase | ABB29_00040 | Q4UPQ3 | + | 7014 - 7700 | 24299.9 |
| hypothetical protein | ABB29_00045 | Not Available | + | 7724 - 8392 | 24898.4 |
| phosphomannomutase | ABB29_00050 | Q02E40 | - | 8498 - 10780 | 81451.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
