Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Pseudoxanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Pseudoxanthomonas |
| Species | Pseudoxanthomonas dokdonensis |
| Strain | strain DSM 21858 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629888 bp
Thymine Count
632286 bp
Guanine Count
1148575 bp
Cytosine Count
1142909 bp
Genome Length
3553658 bp
Protein-coding Genes
3003 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kinase | ABB29_00105 | Not Available | + | 21835 - 22494 | 24760.6 |
| nitrogen regulatory protein p-ii 1 | ABB29_00110 | Q9CJK1 | - | 22498 - 22836 | 12158.9 |
| hypothetical protein | ABB29_00115 | Q46868 | + | 23012 - 23278 | 9908.84 |
| atp-dependent protease | ABB29_00120 | P45049 | + | 23291 - 24793 | 53299.2 |
| 5s ribosomal rna | Not Available | Not Available | + | 24993 - 25107 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 25222 - 28113 | Not Available |
| isocitrate lyase | ABB29_00125 | Q9K9H0 | - | 25145 - 26434 | 46931.3 |
| malate synthase | ABB29_00130 | P95329 | - | 26480 - 28120 | 60457.7 |
| lysr family transcriptional regulator | ABB29_00135 | Q3MCB5 | + | 28228 - 29196 | 35799.3 |
| 16s ribosomal rna | Not Available | Not Available | + | 28596 - 30140 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
