Desulfocarbo indianensis strain SCBM

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfarculia

Order

Desulfarculales

Family

Desulfarculaceae

Genus

Desulfocarbo

Description

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfarculia
OrderDesulfarculales
FamilyDesulfarculaceae
GenusDesulfocarbo
SpeciesDesulfocarbo indianensis
Strainstrain SCBM

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfocarbo indianensis strain SCBM

LBMP00000000.1

Gene Summary

Adenine Count

946379 bp

Thymine Count

943211 bp

Guanine Count

1623247 bp

Cytosine Count

1600962 bp

Genome Length

5114044 bp

Protein-coding Genes

4212 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail sheath proteinAAU61_11165Q6WHE8+2548777 - 255030656195.7
phage tail proteinAAU61_11170Not Available+2550322 - 255078317476.4
Baseplate hub subunitAAU61_11175Not Available+2550799 - 255147625354.6
Tail tape measure proteinAAU61_11180P51731+2551620 - 2555255126896.0
DeoxyribosyltransferaseAAU61_11185Not Available+2555264 - 255557511374.8
hypothetical proteinAAU61_11190Not Available+2555579 - 255604918106.7
hypothetical proteinAAU61_11195Not Available+2556046 - 255633611306.6
phage protein d-like proteinAAU61_11200Not Available+2556403 - 255768646899.8
Putative m15 family peptidaseAAU61_11205Not Available+2557679 - 255805313336.8
Tail assembly-like proteinAAU61_11210Not Available+2558050 - 255846915497.9

Displaying genes 1 – 10 of 4273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

282 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 282 metabolites