Pseudomonas fluorescens strain C3

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain C3 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain demonstrates heterotrophic metabolism, utilizing organic compounds as its energy source, and thrives optimally at a temperature of 25.0°C. As an aerobic organism, P. fluorescens strain C3 requires oxygen for growth, which aligns with its habitat diversity, allowing it to inhabit various environments. The adaptability of Pseudomonas fluorescens strain C3 to multiple habitats suggests its potential role in biogeochemical cycles and its capacity to interact with a variety of organic substrates. This versatility may contribute to its significance in ecological contexts, such as soil health and plant growth promotion. Its oxygen-dependent metabolic pathways may also implicate it in processes like nitrogen cycling or the degradation of environmental pollutants, underscoring its importance in both natural ecosystems and bioremediation strategies. Therefore, P. fluorescens strain C3 exemplifies the ecological resilience and functional diversity characteristic of the Pseudomonas genus, highlighting its potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain C3


Gene Summary

Adenine Count

1370077 bp

Thymine Count

1381324 bp

Guanine Count

1982575 bp

Cytosine Count

1970504 bp

Genome Length

6705574 bp

Protein-coding Genes

5843 genes

Non-Coding Genes

170 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail fiber proteinVC34_17385Not Available-3858283 - 3861498114251.0
Tail assembly protein iVC34_17390O64334-3861495 - 386211521612.1
Putative lipoproteinVC34_17395Not Available-3862173 - 386259214601.6
Putative tail component proteinVC34_17400Not Available-3862650 - 386335726444.3
Putative minor tail protein lVC34_17405Not Available-3863360 - 386402523989.7
Putative minor tail protein mVC34_17410Not Available-3864049 - 386437812401.7
Putative prophage tail length tape measure proteinVC34_17415O64330-3864388 - 3867390105140.0
Hypothetical proteinVC34_17420Not Available-3867418 - 386769010033.0
Hypothetical proteinVC34_17425Not Available-3867738 - 386812113792.3
Tail constituent proteinVC34_17430Not Available-3868131 - 386877822428.6

Displaying genes 1 – 10 of 6013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

393 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 393 metabolites