Pseudomonas fluorescens strain C8

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain C8 is a Gram-negative, rod-shaped bacterium that predominantly exists as single cells and is classified as an aerobic heterotroph. This strain thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Pseudomonas genus, strain C8 is known to inhabit diverse ecological niches, which reflects its versatile metabolic capabilities and adaptability to various habitats. Its heterotrophic nature allows it to utilize organic compounds as energy sources, further enhancing its survival in environments rich in organic matter. The aerobic requirement of Pseudomonas fluorescens strain C8 emphasizes its dependence on oxygen for respiration, a trait that positions it favorably in well-aerated environments, such as soil or water systems. This bacterium's ability to thrive in multiple habitats may contribute to its potential role in biogeochemical cycles, particularly in the degradation of organic pollutants, suggesting its utility in bioremediation applications. The ecological significance of strain C8 lies in its adaptability and metabolic versatility, which may facilitate its involvement in microbial communities and nutrient cycling in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain C8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain C8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain C8


Gene Summary

Adenine Count

1248963 bp

Thymine Count

1265387 bp

Guanine Count

1900128 bp

Cytosine Count

1870278 bp

Genome Length

6287006 bp

Protein-coding Genes

5530 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+107 - 1652Not Available
tryptophan synthase subunit betaVC35_00010Not Available+5003 - 534112425.8
deor faimly transcriptional regulatorVC35_00015Not Available-5424 - 737071783.6
periplasmic proteinVC35_00020Not Available-7385 - 807726215.5
gntr family transcriptional regulatorVC35_00025O05494+8274 - 898426591.1
mangotoxin biosynthesis-involved protein mgobVC35_00030Not Available+9710 - 1048629298.9
aminobenzoate oxygenaseVC35_00035Not Available+10483 - 1141234899.8
peptide transporterVC35_00040A0A6J4B487+11426 - 14836126228.0
polyketide cyclaseVC35_00045Not Available+14859 - 1532616797.0
5s ribosomal rnaNot AvailableNot Available+15432 - 15547Not Available

Displaying genes 1 – 10 of 5594 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

419 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000232(4S)-perillyl alcoholC10H16OChemical structure of (4S)-perillyl alcoholNot available
Average152.237Da
Monoisotopic152.1201151Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da

Displaying 1–10 of 419 metabolites