Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrophosphatase | RT97_00045 | Not Available | + | 6586 - 9123 | 85693.0 |
| polyketide cyclase | RT97_00050 | Not Available | + | 9126 - 9494 | 13800.2 |
| hypothetical protein | RT97_00055 | Not Available | + | 9687 - 9947 | 9298.11 |
| tetr family transcriptional regulator | RT97_00060 | Not Available | - | 9944 - 10573 | 22811.2 |
| metal-dependent hydrolase | RT97_00065 | Not Available | + | 10694 - 11533 | 32091.1 |
| hypothetical protein | RT97_00070 | Not Available | - | 11544 - 12140 | 22085.2 |
| hypothetical protein | RT97_00075 | Not Available | - | 12373 - 12624 | 8816.59 |
| hypothetical protein | RT97_00080 | Not Available | - | 12611 - 12979 | 13188.5 |
| hypothetical protein | RT97_00085 | Not Available | - | 12997 - 13908 | 34324.8 |
| 3-oxoacyl-acp synthase | RT97_00090 | Not Available | - | 13905 - 15863 | 71708.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.