Enterococcus raffinosus strain DSM 5633

microaerophile

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Enterococcus

Description

Enterococcus raffinosus strain DSM 5633 is a Gram-positive bacterium that predominantly inhabits the intestines of various hosts. This strain is characterized as a microaerophile, indicating that it requires reduced oxygen levels for optimal growth, which is typical for many enterococci found within the gastrointestinal tract. The microaerophilic nature of E. raffinosus suggests its adaptation to the low-oxygen environments often present in intestinal niches, where it may play a role in the complex microbial community interacting with host physiology. Enterococcus species, including E. raffinosus, are known for their resilience and ability to survive in diverse conditions, suggesting that this strain may contribute to gut health through fermentative processes or by competing with pathogenic organisms. The presence of E. raffinosus in the intestinal microbiome underscores its potential role in maintaining microbial balance, nutrient absorption, and possibly influencing host immune responses. Further investigation into the specific metabolic pathways and interactions of E. raffinosus in its habitat could provide deeper insights into its ecological significance and potential applications in probiotics or gut health management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus raffinosus
Strainstrain DSM 5633

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Enterococcus raffinosus strain DSM 5633
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatintestines
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Enterococcus raffinosus strain DSM 5633


Gene Summary

Adenine Count

1280147 bp

Thymine Count

1262789 bp

Guanine Count

839752 bp

Cytosine Count

810873 bp

Genome Length

4193576 bp

Protein-coding Genes

4043 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Pblb-like tail proteinRV13_GL002029Not Available-375653 - 37812191875.6
Gp18RV13_GL002030Not Available-378130 - 37848913201.0
Tail length tape-measure proteinRV13_GL002031Not Available-378502 - 383142167885.0
AttlNot AvailableNot Available+378924 - 378938Not Available
Hypothetical proteinRV13_GL002032Not Available-383146 - 38349313640.3
Gp15RV13_GL002033Not Available-383526 - 38390013860.0
Major tail proteinRV13_GL002034Not Available-383972 - 38440915536.6
Hypothetical proteinRV13_GL002035Not Available-384425 - 38474812095.5
Hypothetical proteinRV13_GL002036Not Available-384787 - 38529318855.8
Hypothetical proteinRV13_GL002037Not Available-385316 - 3855558734.39

Displaying genes 1 – 10 of 4166 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da

Displaying 1–1 of 1 metabolites