Roseivirga seohaensis subsp. aquiponti strain D-25

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Roseivirgaceae

Genus

Roseivirga

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyRoseivirgaceae
GenusRoseivirga
SpeciesRoseivirga seohaensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivirga seohaensis subsp. aquiponti strain D-25

Accession NumberJSVA00000000.1

Gene Summary

Adenine Count

1241683 bp

Thymine Count

1242051 bp

Guanine Count

798981 bp

Cytosine Count

800699 bp

Genome Length

4083414 bp

Protein-coding Genes

3333 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aromatic ring-opening dioxygenase ligaOB69_18055Not Available-4056389 - 405700921898.0
peptide chain release factor 3OB69_18065Q6AJD2+4058244 - 405982459890.6
pseudouridine synthaseOB69_18070Not Available+4059824 - 406054927839.9
hypothetical proteinOB69_18075Not Available+4060575 - 406093713987.6
hypothetical proteinOB69_18080Not Available+4061129 - 406139210063.3
thiamine-monophosphate kinaseOB69_18095O27447-4063076 - 406412538271.6
membrane proteinOB69_18100P54442-4064285 - 406536140452.6
hypothetical proteinOB69_18105O58010-4065428 - 406582914758.8
hypothetical proteinOB69_18110Not Available+4065947 - 406635715617.7
heme biosynthesis protein hemyOB69_18115P72731+4066357 - 406668311870.0

Displaying genes 3351 – 3360 of 3378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

156 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da

Displaying 1–10 of 156 metabolites