Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium subsaxonicum WB 4.1-42 (DSM 21790) is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and thrives optimally at a temperature of 25.0°C. As a member of the genus Flavobacterium, this strain is characterized by its distinct morphological and physiological traits, which align with the general characteristics of the Flavobacteriaceae family. The Gram-negative nature of Flavobacterium subsaxonicum WB 4.1-42 suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which is typical for this group of bacteria. This structural feature may influence its environmental interactions and resilience to certain antimicrobial agents. Additionally, the aerobic requirement indicates that this strain relies on oxygen for its metabolic processes, which may influence its habitat preferences, potentially favoring well-aerated environments such as freshwater or soil. Given the optimal growth temperature of 25.0°C, Flavobacterium subsaxonicum WB 4.1-42 likely occupies ecological niches that are temperate, where such conditions are prevalent. This adaptability to moderate temperatures and aerobic conditions could suggest a role in biogeochemical cycling within its native ecosystem, particularly in the breakdown of organic materials. Further research could elucidate its specific ecological functions and contributions to microbial communities, particularly in environments rich in organic substrates.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium subsaxonicum
StrainWB 4.1-42 = DSM 21790 strain WB 4.1-42

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790 strain WB 4.1-42


Gene Summary

Adenine Count

1357249 bp

Thymine Count

1349420 bp

Guanine Count

969734 bp

Cytosine Count

960771 bp

Genome Length

4637174 bp

Protein-coding Genes

3785 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinQ766_00005Not Available+1 - 2217496.25
23s ribosomal rnaNot AvailableNot Available+83 - 2970Not Available
16s ribosomal rnaNot AvailableNot Available+131 - 1656Not Available
hypothetical proteinQ766_00015Not Available-2452 - 309023782.7
hypothetical proteinQ766_00020Not Available+3191 - 376022027.2
hypothetical proteinQ766_00025Not Available+3845 - 40849137.42
16s rrna methyltransferaseQ766_00030Not Available-4341 - 504826640.9
trna threonylcarbamoyladenosine biosynthesis protein gcpQ766_00035Not Available-5048 - 607036596.2
hypothetical proteinQ766_00040Not Available+6250 - 10692165684.0
6-phosphofructokinaseQ766_00045Not Available+10902 - 1188835434.6

Displaying genes 1 – 10 of 3829 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites