Ligilactobacillus pobuzihii strain NBRC 103219

Gram-positiveRod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus pobuzihii strain NBRC 103219 is a Gram-positive bacterium characterized by its rod-shaped morphology. This strain is notable for the presence of flagella, which may contribute to its motility and ecological adaptability. The organism has a single replicon, indicating a streamlined genetic structure, which may play a role in its replication and metabolic efficiency. The strain is cataloged under the accession number JQCN00000000.1, facilitating scientific reference and further research. As a member of the Ligilactobacillus genus, this bacterium is likely involved in various ecological interactions, particularly in fermentation processes and possibly in the human gut microbiome. The presence of flagella in this strain suggests an ability to navigate its environment, which is crucial for survival and competition in diverse habitats. This motility may enhance Ligilactobacillus pobuzihii's role in nutrient acquisition and its overall ecological niche. Understanding the ecological functions and interactions of such microorganisms can provide insights into their contributions to fermentation processes and gut health, making them significant in both environmental and health-related microbiological studies.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus pobuzihii
Strainstrain NBRC 103219

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ligilactobacillus pobuzihii strain NBRC 103219
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus pobuzihii strain NBRC 103219


Gene Summary

Adenine Count

735519 bp

Thymine Count

722150 bp

Guanine Count

455038 bp

Cytosine Count

427213 bp

Genome Length

2340699 bp

Protein-coding Genes

2063 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinIV66_GL001480Not AvailablePositive982998 - 98331512183.6
hypothetical proteinIV66_GL001482Not AvailablePositive983716 - 9839077340.65
hypothetical proteinIV66_GL001483Not AvailablePositive983894 - 9840947787.2
hypothetical proteinIV66_GL001484Not AvailablePositive984106 - 98438410957.6
hypothetical proteinIV66_GL001485Not AvailablePositive984368 - 98464310865.8
Hypothetical proteinIV66_GL001486P04892Positive984658 - 98531424292.5
Hypothetical proteinIV66_GL001487Not AvailablePositive985319 - 98603828176.2
Hnh homing endonucleaseIV66_GL001488Not AvailablePositive986013 - 98702038703.2
Single-stranded dna-binding proteinIV66_GL001489Q8DXI7Positive987077 - 98748715070.3
Putative dnaa analogIV66_GL001490Not AvailablePositive987496 - 98818827468.3

Displaying genes 11 – 20 of 2153 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

148 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00008001,8-diazacyclotetradecane-2,9-dioneC12H22N2O2Chemical structure of 1,8-diazacyclotetradecane-2,9-dioneNot available
Average226.32Da
Monoisotopic226.168127956Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 148 metabolites

Health Effects

No health effects information available for this bacterium.