Cryobacterium roopkundense strain RuG17

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium roopkundense strain RuG17 is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and optimal growth temperature of 16.0°C. This strain exhibits distinct morphological and physiological traits typical of the genus Cryobacterium, which is known for its psychrotolerant capabilities, allowing it to thrive in cold environments. The Gram-positive nature of C. roopkundense RuG17 indicates a robust peptidoglycan layer in its cell wall, which can provide resilience in various environmental conditions. The rod shape of the bacterium is indicative of its cell division and growth patterns, which may contribute to its ecological adaptability. Given its optimal temperature preference of 16.0°C, this strain is likely well-suited for habitats that experience cooler climates, such as high-altitude regions or polar environments. Aerobic growth requirements suggest that C. roopkundense RuG17 engages in metabolic processes that rely on oxygen, which may influence its ecological niche and interactions with other microorganisms in its environment. The combination of these traits points to the strain's potential role in biogeochemical cycles in cold ecosystems, where it may participate in organic matter decomposition and nutrient cycling. This adaptation to low temperatures and the aerobic lifestyle might enable Cryobacterium roopkundense strain RuG17 to be a significant contributor to microbial communities in glacial or subglacial habitats, where it could play a role in shaping local biodiversity and ecological dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium roopkundense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium roopkundense strain RuG17

Accession NumberJPXF00000000.1

Gene Summary

Adenine Count

758984 bp

Thymine Count

753076 bp

Guanine Count

1418511 bp

Cytosine Count

1426244 bp

Genome Length

4356826 bp

Protein-coding Genes

3249 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
luciferaseGY21_03840Not Available+794233 - 79512031726.0
2,3-butanediol dehydrogenaseGY21_03850Not Available-796352 - 79740737095.7
30s ribosomal protein s15GY21_03855Not Available+797956 - 79822510197.5
amino acid permeaseGY21_03860Not Available+798428 - 79994853645.8
nadph-dependent fmn reductaseGY21_03870Not Available+801300 - 80191721570.8
polynucleotide phosphorylaseGY21_03875Not Available+802044 - 80433280527.0
hypothetical proteinGY21_03880Not Available+804473 - 80533328720.7
hypothetical proteinGY21_03885Not Available+805377 - 80571812260.9
formate hydrogenaseGY21_03890Not Available-805796 - 80729554318.9
hydrogenaseGY21_03895Not Available-807295 - 80860544741.1

Displaying genes 621 – 630 of 3301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites