Cryobacterium roopkundense strain RuG17

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Cryobacterium

Description

Cryobacterium roopkundense strain RuG17 is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and optimal growth temperature of 16.0°C. This strain exhibits distinct morphological and physiological traits typical of the genus Cryobacterium, which is known for its psychrotolerant capabilities, allowing it to thrive in cold environments. The Gram-positive nature of C. roopkundense RuG17 indicates a robust peptidoglycan layer in its cell wall, which can provide resilience in various environmental conditions. The rod shape of the bacterium is indicative of its cell division and growth patterns, which may contribute to its ecological adaptability. Given its optimal temperature preference of 16.0°C, this strain is likely well-suited for habitats that experience cooler climates, such as high-altitude regions or polar environments. Aerobic growth requirements suggest that C. roopkundense RuG17 engages in metabolic processes that rely on oxygen, which may influence its ecological niche and interactions with other microorganisms in its environment. The combination of these traits points to the strain's potential role in biogeochemical cycles in cold ecosystems, where it may participate in organic matter decomposition and nutrient cycling. This adaptation to low temperatures and the aerobic lifestyle might enable Cryobacterium roopkundense strain RuG17 to be a significant contributor to microbial communities in glacial or subglacial habitats, where it could play a role in shaping local biodiversity and ecological dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusCryobacterium
SpeciesCryobacterium roopkundense
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cryobacterium roopkundense strain RuG17

Accession NumberJPXF00000000.1

Gene Summary

Adenine Count

758984 bp

Thymine Count

753076 bp

Guanine Count

1418511 bp

Cytosine Count

1426244 bp

Genome Length

4356826 bp

Protein-coding Genes

3249 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dehydrogenaseGY21_16355Not Available+3382110 - 338328241829.2
ap endonucleaseGY21_16360Not Available+3383291 - 338429237815.3
rok family transcriptional regulatorGY21_16365Not Available-3384553 - 338574941105.5
glycosyl hydrolaseGY21_16375Not Available+3387264 - 338938475123.1
xylose isomeraseGY21_16380Not Available+3389420 - 339040034499.6
phosphodiesteraseGY21_16385Not Available-3390673 - 339207050957.8
hydrolase tatdGY21_16390Not Available-3392067 - 339293331544.4
peptide chain release factor 1GY21_16415Not Available-3395238 - 339631739919.0
transcription termination factor rhoGY21_16420Not Available-3396317 - 339865084152.2
serine kinaseGY21_16425Not Available-3398970 - 339992032912.9

Displaying genes 2561 – 2570 of 3301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites