Helicobacter pylori strain YN4-84

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain YN4-84 is a Gram-negative, microaerophilic bacterium characterized by its spirilla shape and single cell arrangement. This strain thrives optimally at a temperature of 37.0°C, which corresponds to the average human body temperature, reinforcing its adaptation to a host-associated habitat. As a member of the Helicobacter genus, strain YN4-84 is typically found in the gastric environment of its host, where it plays a role in the complex microbiota of the gastrointestinal tract. Its microaerophilic nature indicates that it requires reduced levels of oxygen for optimal growth, which is consistent with the low-oxygen conditions of the stomach lining where it colonizes. The ecological insight into Helicobacter pylori strain YN4-84 suggests that its specific adaptations not only facilitate its survival in a challenging environment but may also influence the overall composition of the gastric microbiome. This interplay between H. pylori and its host-associated habitat underscores the importance of studying such strains to understand their role in health and disease within gastric ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain YN4-84

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain YN4-84
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain YN4-84


Gene Summary

Adenine Count

499109 bp

Thymine Count

495525 bp

Guanine Count

313113 bp

Cytosine Count

314665 bp

Genome Length

1633405 bp

Protein-coding Genes

1427 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinJM68_04750Not Available+901213 - 90148510075.8
AttlNot AvailableNot Available+901416 - 901427Not Available
Putative integraseJM68_04755Not Available+901478 - 90259943350.1
Hypothetical proteinJM68_04760Not Available+902596 - 9028118363.14
Hypothetical proteinJM68_04765Not Available+902813 - 90312112073.7
Putative phage replication proteinJM68_04770Not Available+903118 - 90411338634.3
Dna helicaseJM68_04775Not Available+904311 - 90457710599.1
Putative dna helicase, putative dna repair proteinJM68_04780Not Available+904603 - 90575744649.7
Dna primaseJM68_04785Not Available+905768 - 90732760448.5
Putative chromosome segregation proteinJM68_04790Not Available+907324 - 90899764989.2

Displaying genes 1 – 10 of 1496 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites