Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain B1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914785 bp
Thymine Count
911779 bp
Guanine Count
1652245 bp
Cytosine Count
1677338 bp
Genome Length
5156147 bp
Protein-coding Genes
4582 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative dna methylase | IH86_16890 | Not Available | - | 3552392 - 3562576 | 365812.0 |
| Virion associated protein | IH86_16895 | Not Available | - | 3562654 - 3563874 | 44155.9 |
| Acetyltransferase | IH86_16905 | Not Available | - | 3564974 - 3565414 | 16367.8 |
| Hypothetical protein | IH86_16910 | Not Available | - | 3565478 - 3566059 | 20042.5 |
| Virion-associated protein | IH86_16915 | Not Available | - | 3566056 - 3567630 | 56275.3 |
| Esterase | IH86_16920 | Not Available | - | 3567736 - 3570684 | 101449.0 |
| Sialidase domain-containing/calx-like domain superfamily protein | IH86_16925 | Not Available | - | 3570742 - 3573462 | 96633.6 |
| Endoglucanase | IH86_16930 | Not Available | - | 3573518 - 3574279 | 26846.8 |
| Hypothetical protein | IH86_16935 | Not Available | - | 3574245 - 3574838 | 22111.1 |
| Virion associated protein | IH86_16940 | Not Available | - | 3574838 - 3575551 | 26487.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
