Escherichia coli 1-250-04_S3_C2

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 1-250-04_S3_C2 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, reflecting its adaptation to host-associated environments, where it can be found in various mammalian hosts. As a facultative anaerobe, E. coli 1-250-04_S3_C2 has the metabolic flexibility to grow in both the presence and absence of oxygen, allowing it to colonize diverse niches within the host's microbiome. The Gram-negative cell wall structure of E. coli 1-250-04_S3_C2, characterized by a thin peptidoglycan layer surrounded by an outer membrane, may contribute to its resilience against certain environmental stresses, including the presence of antimicrobial agents. The ability to exist in pairs or as singles could facilitate interactions with other microbial species or host cells, potentially influencing community dynamics within the host-associated habitat. Understanding the traits of E. coli 1-250-04_S3_C2 may provide insights into its role within the gastrointestinal microbiome, where it may contribute to metabolic processes or compete with other microorganisms for resources. Such ecological interactions are essential for maintaining microbial balance and host health, highlighting the importance of studying specific strains to elucidate their functional contributions in complex biological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain1-250-04_S3_C2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 1-250-04_S3_C2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 1-250-04_S3_C2


Gene Summary

Adenine Count

1305175 bp

Thymine Count

1305533 bp

Guanine Count

1351610 bp

Cytosine Count

1355597 bp

Genome Length

5317915 bp

Protein-coding Genes

5173 genes

Non-Coding Genes

528 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Transposase is1AC28_0270Not Available-266334 - 2665588338.16
Transcriptional regulatorAC28_0271Not Available-266761 - 26716514830.5
Dna-binding proteinAC28_0272Not Available+267464 - 2676677371.28
Hypothetical proteinAC28_0273Not Available+267689 - 26803913126.4
Hypothetical proteinAC28_0274Not Available+268050 - 26832810405.4
Dna modification methyltransferaseAC28_0275Not Available+268340 - 2685829045.64
Membrane proteinAC28_0276Not Available+268579 - 2686924228.49
Hypothetical proteinAC28_0277Not Available+268779 - 2689827944.49
hypothetical proteinAC28_0278Not Available+269306 - 26969514652.2
Replication proteinAC28_0279Not Available+269692 - 272532108207.0

Displaying genes 1 – 10 of 5701 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites