Escherichia coli 5-366-08_S1_C3

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 5-366-08_S1_C3 is a Gram-negative, rod-shaped bacterium commonly found in host-associated environments. This strain exhibits a cellular arrangement primarily in pairs and singles, which is characteristic of many E. coli strains. It thrives optimally at a temperature of 37.0°C, a temperature that aligns with the physiological conditions of its typical mammalian hosts. As a facultative anaerobe, E. coli 5-366-08_S1_C3 possesses the metabolic flexibility to utilize both aerobic and anaerobic respiration, allowing it to adapt to varying oxygen levels within its habitat. This trait is particularly advantageous in the dynamic environments of the gastrointestinal tract, where oxygen availability may fluctuate. The host-associated nature of this strain suggests its potential involvement in interactions with the host microbiome, which could influence nutrient absorption and immune responses. Understanding the specific roles of E. coli strains like 5-366-08_S1_C3 in host-associated ecosystems contributes to our broader comprehension of microbial ecology and the complex relationships that underpin health and disease in host organisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain5-366-08_S1_C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 5-366-08_S1_C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 5-366-08_S1_C3


Gene Summary

Adenine Count

1345956 bp

Thymine Count

1339870 bp

Guanine Count

1375807 bp

Cytosine Count

1379281 bp

Genome Length

5440914 bp

Protein-coding Genes

5072 genes

Non-Coding Genes

558 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Single-stranded dna binding proteinAB67_0107Not Available+111408 - 11183314984.7
Prop proteinAB67_0108Not Available+111870 - 11241220387.5
putative prophage proteinAB67_0109Not Available+112403 - 1126519897.88
Major capsid protein precursorAB67_0110Not Available+112925 - 11407042535.4
Head maturation proteaseAB67_0111Not Available+114120 - 11468021039.8
Portal proteinAB67_0112Not Available+114682 - 11589645242.9
Head-tail connector proteinAB67_0113Not Available+115889 - 11619111331.5
P58AB67_0114Not Available+116383 - 1166319485.14
Terminase small subunitAB67_0115Not Available+116920 - 11727613399.8
Terminase large subunitAB67_0116Not Available+117260 - 11892162139.1

Displaying genes 1 – 10 of 5630 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites