Pseudomonas putida strain MC4-5222

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain MC4-5222 is a Gram-negative, rod-shaped bacterium that exists as single cells and exhibits facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is nonsporulating and is classified as a heterotroph, utilizing organic compounds as its energy source. Pseudomonas putida strain MC4-5222 is typically found in soil and wastewater habitats, where it plays a role in nutrient cycling and the degradation of organic materials. The adaptability of this strain to various oxygen conditions and its metabolic versatility underscore its potential utility in bioremediation processes, particularly in environments contaminated with organic pollutants. Given its presence in wastewater, Pseudomonas putida strain MC4-5222 may contribute to the breakdown of complex organic substances, thereby enhancing wastewater treatment efficiency. This highlights its ecological importance in maintaining soil health and promoting the detoxification of contaminated environments, making it a subject of interest for further studies in environmental microbiology and biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain MC4-5222

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain MC4-5222
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain MC4-5222


Gene Summary

Adenine Count

1383957 bp

Thymine Count

1378669 bp

Guanine Count

2049509 bp

Cytosine Count

2045961 bp

Genome Length

6858096 bp

Protein-coding Genes

5993 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Prophage repressorHA62_29675Not Available-331137 - 33178723856.3
Hypothetical proteinHA62_29680Not Available+331895 - 3321137966.36
Cii regulatory proteinHA62_29685Not Available+332116 - 33242411695.1
hypothetical proteinHA62_29690Not Available-332807 - 3330227649.05
hypothetical proteinHA62_29695Not Available+333040 - 33381929060.1
Holliday junction resolvaseHA62_29700Not Available+333812 - 33425515651.3
Hypothetical proteinHA62_29705Not Available+334391 - 33527232975.4
Hypothetical proteinHA62_29710Not Available+335422 - 33580813425.4
Hypothetical proteinHA62_29715Not Available+335801 - 33608510295.0
Glycoside hydrolase family 19HA62_29720Not Available+336085 - 33670522329.8

Displaying genes 1 – 10 of 6124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da

Displaying 1–8 of 8 metabolites