Bifidobacterium longum subsp. longum EK13 seq39

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium longum subsp. longum EK13 seq39 is a Gram-positive, nonsporulating rod-shaped bacterium that typically forms clusters, pairs, or single cells. As an anaerobic microbe, it thrives in environments devoid of oxygen, which aligns with its habitat as a host-associated organism. The optimal growth temperature for this strain is 37.0°C, suggesting a physiological adaptation to the warm-blooded hosts it is likely associated with. This strain's nonsporulating nature implies a reliance on stable environments for survival, indicating that it may play a specialized role in the gut microbiota of its host. The presence of Bifidobacterium species, including EK13 seq39, in the gastrointestinal tract is often linked to beneficial effects on host health, including the modulation of gut microbiota composition and enhancement of immune responses. A notable ecological insight is the potential role of Bifidobacterium longum subsp. longum EK13 seq39 in maintaining gut homeostasis. Its anaerobic lifestyle and specific growth conditions may influence its interactions with other microbial communities, highlighting its importance in the complex ecosystem of the gut microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium longum
Strainsubsp. longum EK13 seq39

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium longum subsp. longum EK13 seq39
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Pairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNon-pathogenic

Genome Summary

Bifidobacterium longum subsp. longum EK13 seq39


Gene Summary

Adenine Count

498736 bp

Thymine Count

489785 bp

Guanine Count

738576 bp

Cytosine Count

746488 bp

Genome Length

2474529 bp

Protein-coding Genes

1966 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinEK13BL_10575Not Available+704369 - 70473713216.6
Terminase large subunitEK13BL_10580Not Available+704746 - 70633859688.6
Portal proteinEK13BL_10585Not Available+706365 - 70777451783.3
Capsid maturation proteaseEK13BL_10590Not Available+707764 - 70852527761.8
Capsid proteinEK13BL_10595Not Available+708538 - 70974643468.4
hypothetical proteinEK13BL_10600Not Available+709758 - 71014712183.2
Head-to-tail connector complex proteinEK13BL_10605Not Available+710171 - 71068618162.5
Hypothetical proteinEK13BL_10610Not Available+710683 - 71106613958.2
Hypothetical proteinEK13BL_10615Not Available+711070 - 71136010218.3
Hypothetical proteinEK13BL_10620Not Available+711357 - 71177315091.6

Displaying genes 1 – 10 of 2044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites