Helicobacter pullorum strain 229334/12

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pullorum strain 229334/12 is a Gram-negative, microaerophilic bacterium. This strain is characterized by its ability to thrive in environments with reduced oxygen levels, which is a notable trait among members of the Helicobacter genus. The microaerophilic nature of H. pullorum suggests that it may occupy specific ecological niches where oxygen concentration is lower than that of the atmosphere, such as the gastrointestinal tracts of certain hosts. As a member of the Helicobacter genus, H. pullorum is associated with avian species, particularly poultry, where it has been isolated. Its Gram-negative cell wall structure, typical of many bacteria in this group, is composed of a thin peptidoglycan layer surrounded by an outer membrane, which can confer certain advantages in terms of antibiotic resistance and immune evasion. The microaerophilic requirement of strain 229334/12 may influence its metabolic pathways and interactions within its host environment, potentially contributing to unique symbiotic or commensal relationships. Understanding the specific oxygen requirements and growth conditions of this strain can provide insights into its ecological role, particularly in the context of avian microbiomes. Further exploration of H. pullorum's metabolic capabilities could reveal its contributions to nutrient cycling and overall host health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pullorum
Strainstrain 229334/12

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter pullorum strain 229334/12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcecum; coastal and estuarine soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pullorum strain 229334/12


Gene Summary

Adenine Count

701672 bp

Thymine Count

705924 bp

Guanine Count

380670 bp

Cytosine Count

342221 bp

Genome Length

2131353 bp

Protein-coding Genes

1984 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+40 - 155Not Available
5s ribosomal rnaNot AvailableNot Available+165 - 280Not Available
hypothetical proteinHPU229334_00005Not Available-1 - 75029218.4
hypothetical proteinHPU229334_00010Not Available-767 - 121316935.6
5s ribosomal rnaNot AvailableNot Available+1440 - 1555Not Available
hypothetical proteinHPU229334_00015Not Available-1210 - 272157582.2
hypothetical proteinHPU229334_00020Not Available-2721 - 353332583.7
hypothetical proteinHPU229334_00030Not Available-3736 - 462633971.7
hypothetical proteinHPU229334_00035Not Available-4629 - 8159136819.0
hypothetical proteinHPU229334_00040Not Available+8365 - 888018984.1

Displaying genes 1 – 10 of 2025 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

169 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da
BASm0002282(2R)-2,3-dihydroxy-3-methylbutanoateC5H9O4Chemical structure of (2R)-2,3-dihydroxy-3-methylbutanoateNot available
Average133.1226Da
Monoisotopic133.0500838Da

Displaying 1–10 of 169 metabolites