Escherichia coli 2-005-03_S4_C3

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli 2-005-03_S4_C3 is a Gram-negative, rod-shaped bacterium that typically exhibits cell arrangements in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which aligns with the physiological conditions found in warm-blooded hosts. As a facultative anaerobe, E. coli 2-005-03_S4_C3 is capable of utilizing both aerobic and anaerobic metabolic pathways, allowing it to adapt to varying oxygen levels within its host-associated habitat. The strain's Gram-negative status indicates the presence of an outer membrane containing lipopolysaccharides, which is characteristic of the family Enterobacteriaceae. These structural features may play a role in the bacterium's interactions with the host's immune system, although specific pathogenicity traits or interactions are not detailed in the provided data. Given its habitat and metabolic versatility, E. coli 2-005-03_S4_C3 may contribute to the complex microbial communities within its host, influencing nutrient cycling and microbial dynamics. This adaptability suggests potential roles in maintaining gut homeostasis, where it could participate in fermentation processes or compete with other microorganisms for resources, highlighting the ecological importance of this strain within its specific niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strain2-005-03_S4_C3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli 2-005-03_S4_C3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli 2-005-03_S4_C3


Gene Summary

Adenine Count

1292556 bp

Thymine Count

1293240 bp

Guanine Count

1331594 bp

Cytosine Count

1329205 bp

Genome Length

5246595 bp

Protein-coding Genes

5305 genes

Non-Coding Genes

388 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+871690 - 871701Not Available
Tyrosine-type recombinase/integraseAD23_0899Not Available-871955 - 87300739985.8
Repressor protein ciAD23_0900Not Available-873403 - 87397221168.3
RegulatorAD23_0901Not Available+874118 - 8743217530.23
Regulatory cii family proteinAD23_0902Not Available+874386 - 87489518113.9
hypothetical proteinAD23_0903Not Available+875070 - 8752948718.2
Hypothetical proteinAD23_0904Not Available+875317 - 87565812824.6
Hypothetical proteinAD23_0905Not Available+875726 - 8759598549.14
Zinc-finger containing proteinAD23_0906Not Available+875959 - 8761868293.15
Dna adenine methylaseAD23_0907Not Available+876183 - 87704032217.2

Displaying genes 1 – 10 of 5693 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites