Bifidobacterium thermacidophilum subsp. thermacidophilum strain

anaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium thermacidophilum subsp. thermacidophilum strain is a Gram-positive, anaerobic bacterium that is notable for its ability to thrive in acidic environments. This strain is part of the Bifidobacterium genus, which is recognized for its health-promoting properties, particularly in the context of gut microbiota. The anaerobic nature of B. thermacidophilum subsp. thermacidophilum indicates that it does not require oxygen for growth, instead relying on fermentation processes for energy production. The organism's ability to withstand low pH conditions suggests that it may play a significant role in the fermentation of dietary fibers and carbohydrates within the gastrointestinal tract, contributing to the production of short-chain fatty acids. These metabolites are known to have various beneficial effects on host health, including modulation of gut microbiota composition and enhancement of the intestinal barrier function. Research on the specific metabolic pathways employed by B. thermacidophilum subsp. thermacidophilum in these acidic conditions could provide further insights into its potential applications in probiotic formulations. Additionally, understanding the strain's interactions with other gut microbes and its functional contributions to the gut ecosystem may elucidate its role in promoting a balanced microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium thermacidophilum
Strainsubsp. thermacidophilum strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium thermacidophilum subsp. thermacidophilum strain


Gene Summary

Adenine Count

433527 bp

Thymine Count

451184 bp

Guanine Count

684127 bp

Cytosine Count

664234 bp

Genome Length

2233072 bp

Protein-coding Genes

1811 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Hypothetical proteinTHER5_1087Not Available-857578 - 85836628081.9
phage minor structural proteinTHER5_1089Not Available-858610 - 85892111313.6
AttlNot AvailableNot Available+858650 - 858661Not Available
Phage integrase family prophage lambdach01THER5_1090Not Available+859015 - 85987232652.6
hypothetical proteinTHER5_1091Not Available+859888 - 86016310377.2
hypothetical proteinTHER5_1092Not Available+860182 - 86045410051.0
phage-related putative tail proteinTHER5_1093Not Available-860511 - 86132328642.0
Putative tail fiber proteinTHER5_1094Not Available-861355 - 86190918442.5
ThyxTHER5_1096Not Available-861919 - 86363459625.4
phage tail proteinTHER5_1097Not Available-863622 - 86444329558.6

Displaying genes 1 – 10 of 1880 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

239 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0002143menaquinone-7C46H64O2Chemical structure of menaquinone-7Not available
Average648.9992Da
Monoisotopic648.4906313Da
BASm0002197D-arabinoseC5H10O5Chemical structure of D-arabinoseNot available
Average150.1299Da
Monoisotopic150.05282343Da

Displaying 1–10 of 239 metabolites