Rhodomicrobium udaipurense JA643

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Hyphomicrobiaceae

Genus

Rhodomicrobium

Description

Rhodomicrobium udaipurense JA643 is a Gram-negative, rod-shaped bacterium characterized by its ability to form spores and its facultative aerobe/anaerobe metabolism, thriving optimally at a temperature of 29.0°C. This organism's Gram-negative cell wall structure contributes to its resilience in various environments, while its rod shape may facilitate motility and nutrient uptake, enhancing its adaptability. The capacity for sporulation allows R. udaipurense to survive unfavorable conditions by entering a dormant state, thereby ensuring its persistence in fluctuating environments. As a facultative aerobe/anaerobe, R. udaipurense can utilize oxygen when available but is also capable of anaerobic respiration, providing it with metabolic flexibility that may be advantageous in diverse ecological niches. This metabolic versatility allows R. udaipurense to occupy environments with varying oxygen levels, potentially contributing to its role in nutrient cycling within its habitat. The ability to adapt to both aerobic and anaerobic conditions may also indicate a significant ecological resilience, enabling this microbe to thrive in dynamic ecosystems where oxygen availability can change rapidly.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyHyphomicrobiaceae
GenusRhodomicrobium
SpeciesRhodomicrobium udaipurense
StrainJA643

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationspore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodomicrobium udaipurense JA643


Gene Summary

Adenine Count

680915 bp

Thymine Count

681194 bp

Guanine Count

1132306 bp

Cytosine Count

1136694 bp

Genome Length

3631113 bp

Protein-coding Genes

3243 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Major capsid proteinT281_12830Not Available+2657272 - 265829737623.8
Hypothetical proteinT281_12835Not Available+2658825 - 265923214777.6
Hypothetical proteinT281_12840Not Available+2659235 - 266000527061.8
Baseplate assembly proteinT281_12845Not Available+2660005 - 266054418862.5
Rare lipoprotein aT281_12850Not Available+2660630 - 266101914227.0
hypothetical proteinT281_12855Not Available+2661073 - 26612737004.3
Baseplate componentT281_12860Not Available+2661260 - 266166114640.8
Baseplate assembly proteinT281_12865Not Available+2661663 - 266257432275.5
Hypothetical proteinT281_12870Not Available+2662571 - 26628439576.46
Tail proteinT281_12875Not Available+2662840 - 266347223617.7

Displaying genes 1 – 10 of 3308 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites