Sphingobium cupriresistens LL01 25410_21

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium cupriresistens
StrainLL01 25410_21

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium cupriresistens LL01 25410_21

JACT00000000.1

Gene Summary

Adenine Count

848540 bp

Thymine Count

845495 bp

Guanine Count

1475879 bp

Cytosine Count

1485579 bp

Genome Length

4655494 bp

Protein-coding Genes

4532 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp5, phage portal protein, pbsx familyV473_10770P25480-2161780 - 216242723621.0
transposase is4V473_10775Not Available-2162709 - 216405849421.6
Portal proteinV473_10780P21314-2164159 - 216446411215.5
Gp4, phage terminase, atpase subunitV473_10785P25479-2164461 - 216629969085.8
Gpo family capsid scaffolding proteinV473_10790P51719+2166459 - 216730430209.3
Major capsid protein, p2 familyV473_10795P25477+2167353 - 216840238834.9
Terminase endonuclease subunitV473_10800Not Available+2168522 - 216924725934.1
hypothetical proteinV473_10805Not Available+2169365 - 21695927859.18
Putative head completion proteinV473_10810P25475+2169589 - 217007116889.1
tail proteinV473_10815Not Available+2170071 - 21703047974.67

Displaying genes 1 – 10 of 4655 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

340 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000228(3R,4S,5S,6R)-pentachlorocyclohexeneC6H5Cl5Chemical structure of (3R,4S,5S,6R)-pentachlorocyclohexeneNot available
Average254.36Da
Monoisotopic251.8833887Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000333(1R,4R)-bornane-2,5-dioneC10H14O2Chemical structure of (1R,4R)-bornane-2,5-dioneNot available
Average166.22Da
Monoisotopic166.0993797Da

Displaying 1–10 of 340 metabolites