Pelagimonas varians strain CECT 8663

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Pelagimonas

Description

Pelagimonas varians strain CECT 8663 is a Gram-negative, rod-shaped bacterium that exhibits an optimal growth temperature of 29.0°C and is categorized as an aerobic organism. This strain is part of a broader group of microbes known for their adaptation to aquatic environments, suggesting its potential role in marine or freshwater ecosystems. The Gram-negative nature of Pelagimonas varians indicates a complex cell wall structure, characterized by a thin layer of peptidoglycan surrounded by an outer membrane, a feature that may confer specific survival advantages in competitive environments. The aerobic metabolism of this strain implies that it relies on oxygen for its growth and energy production, which may influence its distribution and ecological interactions in environments where oxygen levels fluctuate. The optimal growth temperature of 29.0°C suggests that Pelagimonas varians thrives in warm aquatic habitats, possibly contributing to biogeochemical cycles in such settings. Given these traits, Pelagimonas varians strain CECT 8663 may play a role in nutrient cycling and organic matter degradation in its native habitat. Its rod shape and Gram-negative classification may also enable it to engage in specific interactions with other microbial communities, potentially influencing community dynamics and ecosystem health. Understanding the physiological and ecological roles of this strain can provide insights into the adaptability of microbial life in varying environmental conditions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPelagimonas
SpeciesPelagimonas varians
Strainstrain CECT 8663

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pelagimonas varians strain CECT 8663


Gene Summary

Adenine Count

1099218 bp

Thymine Count

1095060 bp

Guanine Count

1341998 bp

Cytosine Count

1360831 bp

Genome Length

4897107 bp

Protein-coding Genes

4651 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinPEV8663_00232Not Available-230184 - 23051611611.0
Gene transfer aget (gta) orfg9-like phage major tail proteinPEV8663_00233Not Available-230516 - 23093814672.1
hypothetical proteinPEV8663_00234Not Available-230962 - 23136914181.8
Head-tail connector complex proteinPEV8663_00235Not Available-231366 - 23170412493.0
Dna packaging/head-tail-connectorPEV8663_00236Not Available-231701 - 23229421267.6
Phage major capsid proteinPEV8663_00237Not Available-232456 - 23363741825.1
Trna-arg;Not AvailableNot Available+233238 - 233314Not Available
Putative prohead proteasePEV8663_00238Not Available-233665 - 23420719776.3
hypothetical proteinPEV8663_00239Not Available-234232 - 2344568405.44
Portal proteinPEV8663_00240Not Available-234449 - 23565443158.1

Displaying genes 11 – 20 of 4793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites