Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Octadecabacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Octadecabacter |
| Species | Octadecabacter ascidiaceicola |
| Strain | strain CECT 8868 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723691 bp
Thymine Count
733774 bp
Guanine Count
898310 bp
Cytosine Count
877285 bp
Genome Length
3233060 bp
Protein-coding Genes
3261 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Minor capsid protein | OCA8868_01305 | Not Available | + | 1282861 - 1283187 | 10713.6 |
| hypothetical protein | OCA8868_01306 | Not Available | + | 1283202 - 1283405 | 7340.71 |
| hypothetical protein | OCA8868_01307 | Not Available | + | 1283392 - 1283778 | 14832.1 |
| Integrase | OCA8868_01308 | Not Available | + | 1283759 - 1284814 | 39826.6 |
| Attl | Not Available | Not Available | + | 1284915 - 1284935 | Not Available |
| Putative replication protein | OCA8868_01309 | Not Available | + | 1285186 - 1286049 | 32350.7 |
| Putative xre family transcriptional regulator | OCA8868_01310 | Not Available | + | 1286189 - 1286440 | 9108.96 |
| serine/threonine-protein kinase hipa | OCA8868_01311 | Not Available | + | 1286442 - 1287743 | 48012.6 |
| Gp26 | OCA8868_01312 | Not Available | + | 1288002 - 1289138 | 43282.6 |
| hypothetical protein | OCA8868_01313 | Not Available | + | 1289406 - 1289606 | 7016.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.