Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Octadecabacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Octadecabacter |
| Species | Octadecabacter ascidiaceicola |
| Strain | strain CECT 8868 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
723691 bp
Thymine Count
733774 bp
Guanine Count
898310 bp
Cytosine Count
877285 bp
Genome Length
3233060 bp
Protein-coding Genes
3261 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | OCA8868_00651 | Not Available | - | 656860 - 657270 | 14135.8 |
| Head-tail adaptor protein | OCA8868_00652 | Not Available | - | 657267 - 657602 | 11817.8 |
| Dna packaging/head-tail-connector | OCA8868_00653 | Not Available | - | 657602 - 658201 | 21601.9 |
| Phage major capsid protein | OCA8868_00654 | Not Available | - | 658373 - 659560 | 42098.4 |
| Putative prohead protease | OCA8868_00655 | Not Available | - | 659600 - 660142 | 19260.9 |
| hypothetical protein | OCA8868_00656 | Not Available | - | 660154 - 660372 | 8136.04 |
| Portal protein | OCA8868_00657 | Not Available | - | 660365 - 661546 | 42412.2 |
| Terminase large subunit | OCA8868_00658 | Not Available | - | 661682 - 663037 | 49138.8 |
| Prohead protease and major capsid protein | OCA8868_01303 | Not Available | + | 1282038 - 1282646 | 21787.8 |
| hypothetical protein | OCA8868_01304 | Not Available | + | 1282646 - 1282858 | 7807.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.