Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN04488524_0559 | Not Available | - | 726593 - 728458 | 68303.7 |
| Hypothetical protein | SAMN04488524_0560 | Not Available | - | 728455 - 729600 | 42985.8 |
| Hypothetical protein | SAMN04488524_0561 | Not Available | - | 729600 - 731624 | 70815.3 |
| hypothetical protein | SAMN04488524_0562 | Not Available | - | 731913 - 732290 | 13856.5 |
| 1_nc_021791: phage tail protein | SAMN04488524_0563 | Not Available | - | 732293 - 732775 | 16928.6 |
| 1_nc_021802: structural protein | SAMN04488524_0564 | Not Available | - | 732975 - 733409 | 16432.6 |
| 1_nc_021802: putative tail component | SAMN04488524_0565 | Not Available | - | 733406 - 733825 | 15561.9 |
| 1_nc_021802: phage head-tail joining protein | SAMN04488524_0566 | Not Available | - | 733822 - 734193 | 14114.0 |
| 1_nc_021802: head-tail connector protein | SAMN04488524_0567 | Not Available | - | 734194 - 734670 | 18627.0 |
| hypothetical protein | SAMN04488524_0568 | Not Available | - | 734674 - 734877 | 7633.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.