Cellulophaga tyrosinoxydans strain DSM 21164

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Cellulophaga

Description

Cellulophaga tyrosinoxydans strain DSM 21164 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions, with an optimal growth temperature of 25.0°C. This strain has been characterized for its specific metabolic capabilities, particularly its ability to degrade complex organic compounds, which positions it as a potential player in biotechnological applications related to waste treatment and environmental bioremediation. The Gram-negative cell wall structure of C. tyrosinoxydans contributes to its resilience in various environments, potentially allowing it to interact with diverse microbial communities. Its aerobic nature suggests that it is well-adapted to oxygen-rich habitats, where it may utilize oxygen to metabolize organic substrates efficiently. The optimal growth temperature of 25.0°C indicates its preference for mesophilic conditions, which are often found in natural aquatic environments. Given these traits, C. tyrosinoxydans DSM 21164 may play a significant role in the degradation of cellulose and other polysaccharides in its native ecosystem, contributing to nutrient cycling and organic matter turnover. This underscores the potential of this strain in ecological applications, particularly in processes aimed at biomass conversion and the sustainable management of organic waste.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga tyrosinoxydans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cellulophaga tyrosinoxydans strain DSM 21164

Accession NumberFWXO00000000.1

Gene Summary

Adenine Count

1192184 bp

Thymine Count

1180187 bp

Guanine Count

574241 bp

Cytosine Count

600850 bp

Genome Length

3555791 bp

Protein-coding Genes

3140 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tetratricopeptide repeat-containing proteinSAMN05660703_1008Not Available+1080888 - 108162828479.7
chat domain-containing proteinSAMN05660703_1009Not Available+1081638 - 1084859123862.0
nadp-dependent 3-hydroxy acid dehydrogenase ydfgSAMN05660703_1010Not Available+1085343 - 108605325508.7
pd-(d/e)xk nuclease superfamily proteinSAMN05660703_1011Not Available-1086056 - 1088812105860.0
thrombospondin type 3 repeat-containing proteinSAMN05660703_1012Not Available-1088858 - 109019847352.7
2-amino-3-ketobutyrate coenzyme a ligaseSAMN05660703_1013Not Available-1090312 - 109150543707.9
atp-dependent exodnase (exonuclease v) beta subunit (contains helicase and exonuclease domains)SAMN05660703_1014Not Available-1091508 - 1094636119248.0
superoxide dismutase, fe-mn familySAMN05660703_1015Not Available+1094756 - 109536422420.2
amidophosphoribosyltransferaseSAMN05660703_1016Not Available-1096195 - 109809372155.8
sugar or nucleoside kinase, ribokinase familySAMN05660703_1017Not Available-1098145 - 109907134104.3

Displaying genes 1001 – 1010 of 3178 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites