Desulfovibrio gracilis DSM 16080

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Paucidesulfovibrio

Description

Desulfovibrio gracilis DSM 16080 is a rod-shaped, non-spore-forming bacterium that thrives under anaerobic conditions, with an optimal growth temperature of 37.0°C. This species belongs to the genus Desulfovibrio, which is known for its role in sulfate reduction. As an obligate anaerobe, D. gracilis requires environments devoid of oxygen for its metabolic processes, highlighting its adaptation to niche habitats such as sediments and organic matter-decomposing environments. In laboratory studies, D. gracilis has demonstrated specific metabolic capabilities that allow it to utilize sulfate as a terminal electron acceptor during the oxidation of organic compounds. This metabolic pathway is crucial for the biogeochemical cycling of sulfur in anaerobic ecosystems, contributing to the transformation of sulfates into sulfides, which can play significant roles in nutrient availability and microbial community dynamics. Given its anaerobic lifestyle and metabolic versatility, D. gracilis may be an important player in biotechnological applications, particularly in bioremediation strategies aimed at managing sulfate-rich waste or in the enhancement of anaerobic digestion processes. Its presence in natural environments underscores the intricate relationships between microbial life and geochemical cycles, illustrating the importance of anaerobic bacteria in maintaining ecological balance in their respective habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPaucidesulfovibrio
SpeciesPaucidesulfovibrio gracilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio gracilis DSM 16080


Gene Summary

Adenine Count

661937 bp

Thymine Count

659652 bp

Guanine Count

934806 bp

Cytosine Count

923086 bp

Genome Length

3179481 bp

Protein-coding Genes

2871 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rna . bacterial ssuNot AvailableNot Available+385 - 182018.01
flagellar m-ring protein flifSAMN02745704_00001Not Available-2 - 160059875.5
flagellar hook-basal body complex protein flieSAMN02745704_00002Not Available-1641 - 196111924.6
23s ribosomal rna . bacterial lsuNot AvailableNot Available+2321 - 524618.01
flagellar basal-body rod protein flgcSAMN02745704_00003Not Available-2008 - 244516363.6
flagellar basal-body rod protein flgbSAMN02745704_00004Not Available-2446 - 285615231.3
tfp pilus assembly protein pilfSAMN02745704_00005Not Available+3289 - 385220826.7
phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolaseSAMN02745704_00006Not Available+4005 - 460421970.6
gtp-binding protein hflxSAMN02745704_00007Not Available+4694 - 628959765.2
5s ribosomal rna . bacterial tsuNot AvailableNot Available+5283 - 539718.01

Displaying genes 1 – 10 of 2928 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites