Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix eikelboomii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix eikelboomii strain ATCC 49788
Accession NumberFUYB00000000.1
Gene Summary
Adenine Count
1115587 bp
Thymine Count
1108026 bp
Guanine Count
942897 bp
Cytosine Count
981359 bp
Genome Length
4158727 bp
Protein-coding Genes
3869 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| benzoyl-coa 2,3-dioxygenase component b | SAMN02745130_00734 | Not Available | - | 784694 - 786121 | 54536.3 |
| 2,3-dihydro-2,3-dihydroxybenzoyl-coa ring cleavage enzyme | SAMN02745130_00735 | Not Available | - | 786185 - 787849 | 61411.9 |
| transcriptional regulator, xre family with shikimate kinase activity | SAMN02745130_00736 | Not Available | - | 787962 - 788885 | 33759.7 |
| protein of unknown function | SAMN02745130_00737 | Not Available | + | 789032 - 789502 | 17155.2 |
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | SAMN02745130_00738 | Not Available | + | 789516 - 791057 | 54302.0 |
| benzoate-coa ligase | SAMN02745130_00739 | Not Available | + | 791103 - 792686 | 57319.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN02745130_00740 | Not Available | + | 792670 - 793491 | 31014.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN02745130_00741 | Not Available | + | 793488 - 794651 | 40825.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN02745130_00742 | Not Available | + | 794881 - 795762 | 31705.3 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN02745130_00743 | Not Available | + | 795771 - 796775 | 36170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.