Sediminibacterium ginsengisoli strain DSM 22335

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Sediminibacterium

Description

Sediminibacterium ginsengisoli strain DSM 22335 is a Gram-negative, rod-shaped bacterium characterized as a facultative aerobe/anaerobe, with an optimal growth temperature of 29.0 °C. This non-spore-forming organism is part of a group often associated with various environmental niches, highlighting its adaptability to changing oxygen levels and its ability to thrive in moderately warm conditions. The facultative anaerobic nature of Sediminibacterium ginsengisoli suggests a metabolic flexibility that allows it to utilize both aerobic and anaerobic respiration, which may confer advantages in diverse habitats, such as soil or decaying organic material. Its Gram-negative cell wall structure is indicative of a complex membrane system, which may play a role in its interactions with other microorganisms and the environment. Understanding the physiological traits of Sediminibacterium ginsengisoli provides insight into its potential ecological roles, particularly in nutrient cycling and organic matter decomposition. Its optimal growth temperature of 29.0 °C indicates a preference for warm environments, which may align with its presence in specific biogeographical regions where such temperatures are prevalent. Consequently, this microbe may contribute significantly to soil health and fertility, influencing the microbial community dynamics in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusSediminibacterium
SpeciesSediminibacterium ginsengisoli
Strainstrain DSM 22335

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sediminibacterium ginsengisoli strain DSM 22335


Gene Summary

Adenine Count

1097857 bp

Thymine Count

1093381 bp

Guanine Count

940539 bp

Cytosine Count

950860 bp

Genome Length

4089980 bp

Protein-coding Genes

3586 genes

Non-Coding Genes

45 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transposase dde domain-containing proteinSAMN04488132_1011Not Available+1 - 31111846.6
16s ribosomal rna . bacterial ssuNot AvailableNot Available+1 - 105018.01
protein of unknown functionSAMN04488132_1012Not Available-356 - 105426043.6
signal transduction histidine kinaseSAMN04488132_1013Not Available+1370 - 266248438.2
5s ribosomal rna . bacterial tsuNot AvailableNot Available+2828 - 293818.01
rifampin adp-ribosylating transferaseSAMN04488132_1014Not Available-2678 - 342127484.4
hypothetical proteinSAMN04488132_1015Not Available-3489 - 434333327.0
hypothetical proteinSAMN04488132_1016Not Available-4360 - 489920412.3
hypothetical proteinSAMN04488132_1017Not Available-4954 - 537916062.5
hypothetical proteinSAMN04488132_1018Not Available-5489 - 605521575.8

Displaying genes 1 – 10 of 3631 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites