Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Sediminibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Sediminibacterium |
| Species | Sediminibacterium ginsengisoli |
| Strain | strain DSM 22335 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1097857 bp
Thymine Count
1093381 bp
Guanine Count
940539 bp
Cytosine Count
950860 bp
Genome Length
4089980 bp
Protein-coding Genes
3586 genes
Non-Coding Genes
45 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN04488132_1011 | Not Available | + | 1 - 311 | 11846.6 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 1 - 1050 | 18.01 |
| protein of unknown function | SAMN04488132_1012 | Not Available | - | 356 - 1054 | 26043.6 |
| signal transduction histidine kinase | SAMN04488132_1013 | Not Available | + | 1370 - 2662 | 48438.2 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 2828 - 2938 | 18.01 |
| rifampin adp-ribosylating transferase | SAMN04488132_1014 | Not Available | - | 2678 - 3421 | 27484.4 |
| hypothetical protein | SAMN04488132_1015 | Not Available | - | 3489 - 4343 | 33327.0 |
| hypothetical protein | SAMN04488132_1016 | Not Available | - | 4360 - 4899 | 20412.3 |
| hypothetical protein | SAMN04488132_1017 | Not Available | - | 4954 - 5379 | 16062.5 |
| hypothetical protein | SAMN04488132_1018 | Not Available | - | 5489 - 6055 | 21575.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
