Chitinophaga niabensis strain DSM 24787

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga niabensis strain DSM 24787 is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 29.0°C. This strain is part of the Chitinophagaceae family, which is notable for its ability to degrade chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. The aerobic nature of C. niabensis suggests a metabolic pathway that relies on oxygen for energy production, which may play a significant role in its ecological niche, likely involving the decomposition of organic matter rich in chitin. The optimal growth temperature of 29.0°C indicates that C. niabensis is well-adapted to mesophilic conditions, potentially aligning with environments such as soils or decaying organic matter where temperatures typically hover around room temperature. This adaptability may facilitate its role in nutrient cycling within its ecosystem, particularly in the breakdown of chitinous materials, thus contributing to the recycling of nutrients and supporting the growth of other microorganisms. In summary, Chitinophaga niabensis strain DSM 24787 exemplifies the ecological significance of chitin-degrading bacteria in aerobic environments, underscoring their crucial role in the decomposition processes that maintain soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga niabensis
Strainstrain DSM 24787

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga niabensis strain DSM 24787


Gene Summary

Adenine Count

1926341 bp

Thymine Count

1920849 bp

Guanine Count

1638811 bp

Cytosine Count

1640585 bp

Genome Length

7130081 bp

Protein-coding Genes

5774 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
gliding motility-associated c-terminal domain-containing proteinSAMN04488055_0001Not Available+1 - 3510120745.0
23s ribosomal rna . bacterial lsuNot AvailableNot Available+206 - 309118.01
16s ribosomal rna . bacterial ssuNot AvailableNot Available+285 - 181518.01
type ix secretion system membrane protein, porp/sprf familySAMN04488055_0002Not Available+3521 - 443834013.4
hypothetical proteinSAMN04488055_0003Not Available+4480 - 46115412.6
hypothetical proteinSAMN04488055_0004Not Available+5361 - 55738511.63
membrane proteinase prsw, cleaves anti-sigma factor rsiw, m82 familySAMN04488055_0005Not Available-5570 - 625925438.6
dna polymerase (family 10)SAMN04488055_0006Not Available-6259 - 794162448.9
hypothetical proteinSAMN04488055_0007Not Available-8058 - 83369154.85
large subunit ribosomal protein l27SAMN04488055_0008Not Available-8405 - 86839897.8

Displaying genes 1 – 10 of 5830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites