Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | SAMN02745824_0477 | Not Available | + | 477847 - 478380 | 19285.6 |
| hypothetical protein | SAMN02745824_0478 | Not Available | + | 478380 - 478592 | 7887.78 |
| protein translocase subunit yidc | SAMN02745824_0479 | Not Available | + | 478647 - 480461 | 67651.6 |
| gtp-binding protein | SAMN02745824_0480 | Not Available | + | 480465 - 481085 | 22931.8 |
| glutathione s-transferase | SAMN02745824_0481 | Not Available | + | 481166 - 481837 | 25538.5 |
| succinyldiaminopimelate desuccinylase | SAMN02745824_0482 | Not Available | + | 481847 - 482989 | 40768.6 |
| dna-nicking endonuclease, smr domain | SAMN02745824_0483 | Not Available | - | 483000 - 483560 | 20343.6 |
| membrane-bound lytic murein transglycosylase a | SAMN02745824_0484 | Not Available | - | 483564 - 484886 | 47091.9 |
| predicted lipid-binding transport protein, tim44 family | SAMN02745824_0485 | Not Available | - | 484930 - 485616 | 25156.6 |
| protein translocase subunit secb | SAMN02745824_0486 | Not Available | + | 485901 - 486413 | 18649.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.