Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN02745824_3160 | Not Available | + | 3236560 - 3237327 | 27030.2 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN02745824_3161 | Not Available | + | 3237480 - 3238106 | 23078.0 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SAMN02745824_3162 | Not Available | - | 3238179 - 3239411 | 43918.9 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN02745824_3163 | Not Available | + | 3239622 - 3241922 | 83822.8 |
| outer membrane lipoprotein-sorting protein | SAMN02745824_3164 | Not Available | + | 3242004 - 3242633 | 23166.0 |
| exodeoxyribonuclease-3 | SAMN02745824_3165 | Not Available | + | 3242940 - 3243734 | 30771.4 |
| gtp cyclohydrolase ii | SAMN02745824_3166 | Not Available | + | 3243735 - 3244811 | 38346.6 |
| l,d-transpeptidase catalytic domain | SAMN02745824_3167 | Not Available | + | 3244808 - 3245314 | 18303.8 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN02745824_3168 | Not Available | - | 3245429 - 3245956 | 17880.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02745824_3169 | Not Available | + | 3246153 - 3246797 | 24023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.