Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02745824_3150 | Not Available | + | 3226049 - 3226621 | 21145.4 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN02745824_3151 | Not Available | - | 3226643 - 3227506 | 30320.0 |
| hypothetical protein | SAMN02745824_3152 | Not Available | - | 3227572 - 3227778 | 7630.1 |
| exodeoxyribonuclease vii large subunit | SAMN02745824_3153 | Not Available | - | 3227856 - 3229316 | 52895.5 |
| phosphoribosylamine--glycine ligase | SAMN02745824_3154 | Not Available | + | 3229333 - 3230628 | 45251.7 |
| ca-activated chloride channel family protein | SAMN02745824_3155 | Not Available | + | 3230778 - 3232526 | 63640.4 |
| ompa-ompf porin, oop family | SAMN02745824_3156 | Not Available | + | 3232723 - 3233457 | 25267.1 |
| predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domain | SAMN02745824_3157 | Not Available | + | 3233641 - 3234282 | 22459.8 |
| putative hemolysin | SAMN02745824_3158 | Not Available | - | 3234312 - 3235613 | 46927.7 |
| outer membrane protein ompa | SAMN02745824_3159 | Not Available | + | 3235795 - 3236475 | 24075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.