Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN02745824_3140 | Not Available | + | 3208494 - 3209429 | 34259.1 |
| l-aspartate oxidase | SAMN02745824_3141 | Not Available | + | 3209426 - 3211021 | 58493.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN02745824_3142 | Not Available | - | 3211078 - 3213252 | 80253.0 |
| nitroreductase | SAMN02745824_3143 | Not Available | + | 3213407 - 3214084 | 24839.6 |
| acyl-homoserine-lactone acylase | SAMN02745824_3144 | Not Available | - | 3214118 - 3216313 | 81312.6 |
| leucyl aminopeptidase | SAMN02745824_3145 | Not Available | + | 3216455 - 3218032 | 54530.2 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN02745824_3146 | Not Available | + | 3218125 - 3220704 | 94296.9 |
| zn-dependent dipeptidase, dipeptidase homolog | SAMN02745824_3147 | Not Available | + | 3220735 - 3221862 | 40733.8 |
| proline 4-hydroxylase (includes rps23 pro-64 3,4-dihydroxylase tpa1), contains sm-20 domain | SAMN02745824_3148 | Not Available | + | 3221895 - 3222632 | 27782.7 |
| tonb-dependent receptor plug domain | SAMN02745824_3149 | Not Available | - | 3222745 - 3225768 | 107728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.