Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | SAMN02745824_2950 | Not Available | - | 3010099 - 3011097 | 36516.5 |
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN02745824_2951 | Not Available | - | 3011258 - 3012760 | 53514.9 |
| eama domain-containing membrane protein rard | SAMN02745824_2952 | Not Available | + | 3012851 - 3013774 | 33131.5 |
| hypothetical protein | SAMN02745824_2953 | Not Available | + | 3013859 - 3015598 | 64266.1 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN02745824_2954 | Not Available | + | 3015635 - 3017191 | 56557.1 |
| uncharacterized conserved protein | SAMN02745824_2955 | Not Available | - | 3017230 - 3017547 | 11250.4 |
| transcriptional regulator, tetr family | SAMN02745824_2956 | Not Available | + | 3017662 - 3018246 | 21557.7 |
| uncharacterized iron-regulated membrane protein | SAMN02745824_2957 | Not Available | - | 3018255 - 3019802 | 55724.7 |
| hypothetical protein | SAMN02745824_2958 | Not Available | - | 3019799 - 3020347 | 19496.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN02745824_2959 | Not Available | + | 3020474 - 3022711 | 81728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.