Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | SAMN02745824_2480 | Not Available | + | 2531971 - 2533368 | 49642.2 |
| pep-cterm protein-sorting domain-containing protein | SAMN02745824_2481 | Not Available | - | 2533409 - 2534062 | 21945.4 |
| branched-chain amino acid aminotransferase | SAMN02745824_2482 | Not Available | + | 2534308 - 2535225 | 33243.8 |
| hypothetical protein | SAMN02745824_2483 | Not Available | + | 2535222 - 2535968 | 28006.2 |
| hypothetical protein | SAMN02745824_2484 | Not Available | + | 2536116 - 2536457 | 12460.4 |
| pilz domain-containing protein | SAMN02745824_2485 | Not Available | - | 2536495 - 2536857 | 13416.1 |
| Trna-ser | Not Available | Not Available | + | 2537178 - 2537267 | Not Available |
| lytic murein transglycosylase | SAMN02745824_2487 | Not Available | + | 2537453 - 2538517 | 38801.4 |
| rare lipoprotein a | SAMN02745824_2488 | Not Available | + | 2538501 - 2539547 | 36499.1 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN02745824_2489 | Not Available | + | 2539584 - 2540744 | 41369.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.