Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | SAMN02745824_2286 | Not Available | + | 2342913 - 2343479 | 21279.4 |
| dna recombination protein rmuc | SAMN02745824_2287 | Not Available | + | 2343574 - 2344965 | 51635.7 |
| rna methyltransferase, trmh family | SAMN02745824_2288 | Not Available | - | 2344971 - 2345786 | 29353.2 |
| phosphocarrier protein | SAMN02745824_2289 | Not Available | - | 2345792 - 2346070 | 9661.67 |
| pts system, mannose-specific iia component | SAMN02745824_2290 | Not Available | - | 2346067 - 2346471 | 14208.4 |
| upf0042 nucleotide-binding protein | SAMN02745824_2291 | Not Available | - | 2346477 - 2347412 | 34776.2 |
| hpr(ser) kinase/phosphatase | SAMN02745824_2292 | Not Available | - | 2347409 - 2347852 | 16116.6 |
| two-component system, ompr family, sensor histidine kinase chvg | SAMN02745824_2293 | Not Available | - | 2347849 - 2349462 | 58962.9 |
| two component transcriptional regulator, winged helix family | SAMN02745824_2294 | Not Available | - | 2349434 - 2350138 | 26570.8 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN02745824_2295 | Not Available | + | 2350378 - 2351973 | 58008.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.