Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingorhabdaceae
Genus
Parasphingorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingorhabdaceae |
| Genus | Parasphingorhabdus |
| Species | Parasphingorhabdus marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingorhabdus marina DSM 22363
Accession NumberFSQW00000000.1
Gene Summary
Adenine Count
758321 bp
Thymine Count
754436 bp
Guanine Count
1018748 bp
Cytosine Count
1016423 bp
Genome Length
3547928 bp
Protein-coding Genes
3382 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exosortase a system-associated hydrolase 1 | SAMN02745824_2266 | Not Available | - | 2321561 - 2322370 | 28750.2 |
| hypothetical protein | SAMN02745824_2267 | Not Available | - | 2322379 - 2323089 | 26086.1 |
| phosphopantetheine attachment site | SAMN02745824_2268 | Not Available | - | 2323086 - 2323358 | 9830.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN02745824_2269 | Not Available | - | 2323393 - 2324421 | 39338.5 |
| acyl-coa ligase (amp-forming), exosortase a-associated | SAMN02745824_2270 | Not Available | + | 2324475 - 2326013 | 55593.4 |
| diaminopimelate decarboxylase | SAMN02745824_2271 | Not Available | + | 2326010 - 2327239 | 43065.9 |
| polysaccharide export outer membrane protein | SAMN02745824_2272 | Not Available | + | 2327408 - 2328064 | 23569.8 |
| polysaccharide chain length determinant protein, pep-cterm locus subfamily | SAMN02745824_2273 | Not Available | + | 2328102 - 2329631 | 55043.3 |
| exopolysaccharide/pep-cterm locus tyrosine autokinase | SAMN02745824_2274 | Not Available | + | 2329641 - 2330549 | 32235.6 |
| hypothetical protein | SAMN02745824_2275 | Not Available | + | 2330552 - 2332174 | 57884.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.