Flavobacterium pectinovorum strain DSM 6368

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium pectinovorum strain DSM 6368 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is part of the Flavobacteriaceae family, which is known for its diverse metabolic capabilities and ecological roles. As an aerobic organism, F. pectinovorum strain DSM 6368 requires oxygen for growth, indicating a potential involvement in aerobic degradation processes in its environment. The distinct Gram-negative nature of this strain suggests the presence of a thin peptidoglycan layer surrounded by an outer membrane, which may contribute to its adaptability in various ecological niches. The rod shape can facilitate motility and nutrient uptake, enhancing its survival in dynamic environments such as soil or aquatic systems. F. pectinovorum has been noted for its role in the decomposition of pectin, a polysaccharide commonly found in plant cell walls. This trait not only highlights its potential utility in biotechnological applications, such as waste management and bioremediation, but also underscores its ecological significance in nutrient cycling, particularly in environments rich in organic material. In summary, the aerobic, Gram-negative, rod-shaped characteristics of Flavobacterium pectinovorum strain DSM 6368 position it as a potentially important microbial agent in the breakdown of complex organic compounds, contributing to the recycling of carbon in various ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium pectinovorum
Strainstrain DSM 6368

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium pectinovorum strain DSM 6368
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium pectinovorum strain DSM 6368


Gene Summary

Adenine Count

1882930 bp

Thymine Count

1844919 bp

Guanine Count

973747 bp

Cytosine Count

908918 bp

Genome Length

5610979 bp

Protein-coding Genes

4642 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Baseplate wedge subunitSAMN05444387_3709Not AvailableNegative4175851 - 417626115597.8
zn-binding pro-ala-ala-arg (paar) domain-containing protein, incolved in typevi secretionSAMN05444387_3710Not AvailableNegative4176264 - 41765549100.33
Phage baseplate assembly protein vSAMN05444387_3711Not AvailableNegative4176559 - 417830463405.9
Conserved uncharacterised proteinSAMN05444387_3712Not AvailableNegative4178304 - 417898725899.9
hypothetical proteinSAMN05444387_3713Not AvailableNegative4178990 - 41791485790.04
Putative tail tube protein 2SAMN05444387_3714Not AvailableNegative4179151 - 417959717012.2
Putative tail tube protein 2SAMN05444387_3715Not AvailableNegative4179600 - 418002816386.4
Putative tail sheath proteinSAMN05444387_3716Not AvailableNegative4180059 - 418215276701.4
23s ribosomal rna . bacterial lsuNot AvailableNot AvailablePositive265 - 314518.01
proline iminopeptidaseSAMN05444387_0003Not AvailableNegative665 - 168439079.1

Displaying genes 1 – 10 of 4699 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.