Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Prevotella ruminicola strain KHT3
Accession NumberFRBD00000000.1
Gene Summary
Adenine Count
1067962 bp
Thymine Count
1060583 bp
Guanine Count
912222 bp
Cytosine Count
920732 bp
Genome Length
3961687 bp
Protein-coding Genes
3446 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05216463_106129 | Not Available | + | 1331584 - 1333614 | 76882.9 |
| rhamnogalacturonyl hydrolase yesr | SAMN05216463_106130 | Not Available | + | 1333777 - 1336020 | 85716.6 |
| heparinase ii/iii-like protein | SAMN05216463_106131 | Not Available | + | 1336013 - 1337779 | 67450.9 |
| hypothetical protein | SAMN05216463_106132 | Not Available | + | 1337776 - 1339038 | 48667.0 |
| peroxiredoxin q/bcp | SAMN05216463_106133 | Not Available | - | 1339076 - 1339528 | 16825.1 |
| l-fucose isomerase | SAMN05216463_106134 | Not Available | + | 1339674 - 1340825 | 42246.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase (pcmt) | SAMN05216463_106135 | Not Available | + | 1340829 - 1341989 | 43374.0 |
| hypothetical protein | SAMN05216463_106136 | Not Available | + | 1342060 - 1343214 | 45301.5 |
| topoisomerase-4 subunit b | SAMN05216463_106137 | Not Available | + | 1343211 - 1345160 | 74045.9 |
| four helix bundle protein | SAMN05216463_106138 | Not Available | + | 1345250 - 1345603 | 13428.2 |
Pathways
401 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Glycine Biosynthesis
Glycine Biosynthesis