Marinobacter antarcticus strain CGMCC 1.10835

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Marinobacteraceae

Genus

Marinobacter

Description

Marinobacter antarcticus strain CGMCC 1.10835 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, exhibiting optimal growth at a temperature of 25.0°C. This strain is part of the Marinobacter genus, which is known for its ability to inhabit marine environments, suggesting it may play a significant role in biogeochemical processes within such ecosystems. The Gram-negative nature of this microbe indicates a complex cell envelope structure, characterized by a thin peptidoglycan layer and an outer membrane that may contain lipopolysaccharides. These features are often associated with environmental adaptability, particularly in fluctuating conditions found in marine habitats. The rod shape may confer advantages in motility and nutrient acquisition in aquatic environments, although specific motility traits were not detailed in the provided data. The preference for aerobic conditions suggests that Marinobacter antarcticus strain CGMCC 1.10835 is likely involved in aerobic metabolic processes, contributing to the cycling of organic matter and nutrients in its habitat. Its optimal growth temperature aligns with the moderate thermal conditions typical of many marine ecosystems, further emphasizing its ecological relevance. Overall, the traits of Marinobacter antarcticus strain CGMCC 1.10835 indicate its potential role in marine microbiomes, particularly in processes such as organic matter degradation and nutrient cycling in cold ocean waters. Understanding the specific functions of this strain may shed light on its contributions to marine ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyMarinobacteraceae
GenusMarinobacter
SpeciesMarinobacter antarcticus
Strainstrain CGMCC 1.10835

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinobacter antarcticus strain CGMCC 1.10835


Gene Summary

Adenine Count

832371 bp

Thymine Count

856064 bp

Guanine Count

1054850 bp

Cytosine Count

997501 bp

Genome Length

3740786 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rna . bacterial tsuNot AvailableNot Available+190 - 30418.01
5s ribosomal rna . bacterial tsuNot AvailableNot Available+207 - 32118.01
tyrosyl-trna synthetaseSAMN05216369_0005Not Available-152 - 135444222.4
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN05216369_0006Not Available+1656 - 303550425.8
anhydro-n-acetylmuramic acid kinaseSAMN05216369_0007Not Available+3043 - 414039797.3
iron-sulfur cluster insertion proteinSAMN05216369_0008Not Available-4184 - 453712694.7
protein ccma, bactofilin familySAMN05216369_0009Not Available-4601 - 508016787.7
hypothetical proteinSAMN05216369_0010Not Available-5083 - 582327643.9
n-acetyl-gamma-glutamyl-phosphate reductaseSAMN05216369_0011Not Available-5833 - 687037263.1
chloride channel protein, cic familySAMN05216369_0012Not Available+7026 - 880163330.6

Displaying genes 1 – 10 of 3464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001362octadecanoateC18H35O2Chemical structure of octadecanoateNot available
Average283.4693Da
Monoisotopic283.263705364Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001758(9Z,12Z)-octadecadienoateC18H31O2Chemical structure of (9Z,12Z)-octadecadienoateNot available
Average279.445Da
Monoisotopic279.2329538Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001833(9Z)-hexadecenoateC16H29O2Chemical structure of (9Z)-hexadecenoateNot available
Average253.4003Da
Monoisotopic253.2167552Da

Displaying 1–10 of 26 metabolites