Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus flavefaciens |
| Strain | strain YL228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut; rumen |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
914172 bp
Thymine Count
902966 bp
Guanine Count
792437 bp
Cytosine Count
753831 bp
Genome Length
3365971 bp
Protein-coding Genes
2782 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910280_0398 | Not Available | Negative | 21012 - 21764 | 28236.7 |
| lyzozyme m1 (1,4-beta-n-acetylmuramidase), gh25 family | SAMN02910280_0399 | Not Available | Positive | 21935 - 23236 | 48533.6 |
| arac family transcriptional regulator, arabinose operon regulatory protein | SAMN02910280_0400 | Not Available | Positive | 23606 - 24397 | 31281.3 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN02910280_0401 | Not Available | Negative | 24809 - 26500 | 65293.4 |
| 3-dehydroquinate synthase | SAMN02910280_0402 | Not Available | Positive | 26837 - 27877 | 37896.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN02910280_0403 | Not Available | Positive | 27880 - 29112 | 43664.1 |
| chorismate synthase | SAMN02910280_0404 | Not Available | Positive | 29093 - 30172 | 38777.0 |
| protein of unknown function | SAMN02910280_0405 | Not Available | Positive | 30184 - 30777 | 22896.7 |
| predicted phospholipase, patatin/cpla2 family | SAMN02910280_0406 | Not Available | Positive | 30912 - 31766 | 31891.7 |
| biotin transport system substrate-specific component | SAMN02910280_0407 | Not Available | Negative | 31987 - 32559 | 20333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
