Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Paenacidovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Paenacidovorax |
| Species | Paenacidovorax caeni |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Acidovorax caeni strain R-24608
Accession NumberFPBX00000000.1
Gene Summary
Adenine Count
723778 bp
Thymine Count
706841 bp
Guanine Count
1346750 bp
Cytosine Count
1374966 bp
Genome Length
4152335 bp
Protein-coding Genes
3787 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN04489707_1002164 | Not Available | + | 445911 - 447083 | 40362.0 |
| single-strand binding protein | SAMN04489707_1002165 | Not Available | + | 447250 - 447792 | 19444.8 |
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN04489707_1002166 | Not Available | - | 447988 - 449112 | 41097.1 |
| nudix domain-containing protein | SAMN04489707_1002167 | Not Available | - | 449137 - 449697 | 20888.0 |
| signal transduction histidine kinase | SAMN04489707_1002168 | Not Available | - | 449766 - 451202 | 51035.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04489707_1002169 | Not Available | - | 451199 - 451876 | 24017.9 |
| vrr-nuc domain-containing protein | SAMN04489707_1002170 | Not Available | + | 451986 - 453671 | 62497.2 |
| rad3-related dna helicase | SAMN04489707_1002171 | Not Available | + | 453668 - 456250 | 91856.8 |
| type ii restriction/modification system, dna methylase subunit yeea | SAMN04489707_1002172 | Not Available | + | 456894 - 459836 | 108840.0 |
| tetrathionate reductase subunit a | SAMN04489707_1002173 | Not Available | - | 460100 - 463324 | 116089.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.