Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus amargosae |
| Strain | strain DSM 46136 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
755912 bp
Thymine Count
755883 bp
Guanine Count
2183753 bp
Cytosine Count
2172631 bp
Genome Length
5869713 bp
Protein-coding Genes
5657 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbon-monoxide dehydrogenase small subunit | SAMN05660657_00018 | Not Available | - | 14027 - 14542 | 17846.3 |
| co or xanthine dehydrogenase, fad-binding subunit | SAMN05660657_00019 | Not Available | - | 14533 - 15408 | 30828.8 |
| cytosine/adenosine deaminase | SAMN05660657_00020 | Not Available | + | 15528 - 16910 | 48384.3 |
| pyridoxal 5-phosphate dependent beta-lyase | SAMN05660657_00021 | Not Available | - | 16966 - 18096 | 38938.6 |
| anti-sigma-k factor rska | SAMN05660657_00022 | Not Available | - | 18145 - 18930 | 26197.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660657_00023 | Not Available | - | 18911 - 19609 | 25416.0 |
| sortase family protein | SAMN05660657_00024 | Not Available | - | 19606 - 20247 | 21545.9 |
| protein of unknown function | SAMN05660657_00025 | Not Available | - | 20262 - 21086 | 26502.1 |
| l-histidine nalpha-methyltransferase | SAMN05660657_00026 | Not Available | - | 21173 - 22150 | 35071.3 |
| glutamine amidotransferase | SAMN05660657_00027 | Not Available | - | 22176 - 22865 | 24232.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.